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ADAPTATION OF PSEUDOMONAS STRAIN IN THE PRESENCE OF ZINC IN CONTAMINATED SOILS

Vojtkovб, Hana

First published: 2013-06-20https://doi.org/10.5593/sgem2013/bf6/s25.002View metrics

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Publication details

Title
ADAPTATION OF PSEUDOMONAS STRAIN IN THE PRESENCE OF ZINC IN CONTAMINATED SOILS
Authors
Vojtkovб, Hana
Proceedings
SGEM International Multidisciplinary Scientific GeoConference EXPO Proceedings; 13th SGEM GeoConference NANO, BIO AND GREEN TECHNOLOGIES FOR A SUSTAINABLE FUTURE
Publisher
Stef92 Technology
Year
2013
Pages
85 - 92 pp
ISSN
1314-2704
ISBN
Not available yet
Language
en
Publication type
Conference Paper
References86

  1. Ahemad M. & Malik A. Bioaccumulation of heavy metals by zinc resistant bacteria isolated from agricultural soils irrigated with wastewater. Bacteriology Journal, vol. 2/ issue 1, pp 12-21, 2012.

  2. Bhagat R. & Srivastava S. Growth response of Pseudomonas stutzeri RS34 to ethylenediaminetetraacetic acid (EDTA) and its interaction with z inc. Indian Journal of Experimental Biology, vol. 31/issue 7, pp 590-594, 1993.

  3. Cánovas D. & C ases I. & d e Lorenzo V. Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis. Environmental Microbiology, vol. 5/issue 12, pp 1242-1256, 2003.

  4. Caille O. & Rossier C. & Perrron K. A copper -activated two -component system interacts with zinc and imipenem resistance in Pseudomonas aeruginosa. Journal of Bacteriology, vol. 189/issue 13, pp 4561-4568, 2007.

  5. Čerňanský S. & Urík M. & Ševc J. & Khun M. Biosorption and biovolatilization of arsenic by heat -resistant fungi. Environmental Science and Pollution Research International, vol. 14/special issue 1, pp 31-35, 2007.

  6. Diels L. & Dong Q. & van der Lelie D. & Baeyens W. & Mergeay M. The czc operon of Alcaligenes eutrophus CH34: from resistence mechanism to the removal of heavy metals. Journal of Industrial Microbiology, vol. 14/issue 2, pp 142-153, 1995.

  7. Elomari M. & Coroler L. & Verhille S. & Izard D. & Leclerc H. Pseudomonas monteilii sp. nov., isolated from clinical specimens. International Journal of Systematic Bacteriology, vol. 47/issue 3, pp 846-852, 1997.

  8. Gadd G.M. Metals, minerals and microbes: geomicrobiology and bioremediation. Microbiology, vol. 156/issue 3, pp 609-643, 2010.

  9. Giller K. E. & Witter E. & McGrath S. P. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biology and Biochemistry, vol. 30/issue 10-11, pp 1389-1414, 1998. GeoConference on Nano, Bio and Green – Technologies for a Sustainable Future

  10. Hassan M.T. & van der Leile D. & Springael D. & Römling U. & Ahmed N. & Mergeay M. Identification of a gene cluster, czr, involved in cadmium and zinc resistance in Pseudomonas aeruginosa. Gene, vol. 238/issue 2, pp 417-425, 1999.

  11. Hu N. & Zhao B. Key genes involved in heavy -metal resistance in Pseudomonas putida CD2. FEMS Microbiology Letters, vol. 267/issue 1, pp 17-22, 2007.

  12. Hu P. & Brodie E.L. & Suzuki Y. & McAdams H.H. & Andersen G.L. Whole - genome transcriptional analysis of heavy metal st resses in Caulobacter crescentus. Journal of Bacteriology, vol. 187/issue 24, pp 8437-8449, 2005.

  13. Hussein H. & Moawad H. & Farag S. Isolation and characterization of Pseudomonas resistant to heavy metals contaminants. Arab Journal of Biotechnology, vol. 7/issue 1, pp 13-22, 2004.

  14. Chen X. & Shi J . & Chen Y. & Xu X. & Xu S. & Wang Y. Tolerance and biosorption of copper and zinc by Pseudomonas putida CZ1 isolated from metal- polluted soil. Canadian Journal of Microbiology, vol. 52/issue 4, pp 308-316, 2006.

  15. Choudhury R. & Srivastava S. Zinc resistance mechanisms in bacteria. Current Science, vol. 81/issue 7, pp 768-775, 2001.

  16. Choudhury R. & Srivastava S. Mutational analysis of zinc resistance in Pseudomonas putida strain S4. Current Microbiology, vol. 43/issue 5, pp 316-321, 2001.

  17. Intorne A.C. & de Oliveira M. V. & de M Pereira L. & de Souza Filho G .A. Essential role of the czc determinant for cadmium, cobalt and zinc resistance in Gluconacetobacter diazotrophicus PAI 5. International Microbiology, vol. 15/issue 2, pp 69-78, 2012.

  18. Jurkovič Ľ. & Hiller E. & Veselská V. & Peťková K. Arsenic concentrations in soils impacted by dam failure of coal -ash pond in Zemianske Kostolany, Slovakia . Bulletin of Environmental Contamination and Toxicology, vol. 86/issue 4, pp 433-437, 2011.

  19. Keramati P. & Hoodaji M. & Tahmourespour A. Multi -metal resistance study of bacteria highly resistant to mercury isolated from dental clinic effluent. African Journal of Microbiology Research, vol. 5/issue 7, pp. 831-837, 2011.

  20. Kolenčík M. & Čerňanský S. & Urík M. & Littera P. & Molnárová M. & Gardošová K. & Štubňa J. & Vojtková H. & Chlpík J. Solubilization of toxic metal mineral by the Aspergillus niger strain and oxalic acid. Fresenius Environmenta l Bulletin, vol. 21/issue 8a, pp 2289-2297, 2012.

  21. Lalucat J. & Bennasar A. & Bosch R. & García-Valdés E. & Palleroni N.J. Biology of Pseudomonas stutzeri. Microbiology and Molecular Biology Reviews, vol. 70/issue 2, pp 510-547, 2006.

  22. Legatzki A. & Grass G . & Anton A. & Rensing C. & Nies D. H. Interplay of the Czc system and two P -type ATPases in conferring metal resistance to Ralstonia metallidurans. Journal of Bacteriology, vol. 185/issue 15, pp 4354-4361, 2003.

  23. Moffett B.F. & Nicholson F.A. & Uwakwe N.C. & Chambers B.J. & Harris J.A. & Hill T.C. Zinc contamination decreases the bacterial diversity of agricultural soil. FEMS Microbiology and Ecology, vol. 43/issue 1, pp 13-19, 2003. Section Advances in Biotechnology

  24. Moore E.R.B. & Mau M. & Arnscheidt A. & Bottger E.C. & Hutson R.A. & Collins M.D. & van de Peer Y. & de Wachter R. & Timmis K.N. The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships. Systematic and Applied Microbiology, vol. 19/issue 4, pp 478-492, 1996.

  25. Monchy S. & Benotmane M.A. & Janssen P. & Vallaeys T. & Taghavi S. & van der Lelie D. & Mergey M. Plasmids pMOL28 and pMOL30 of Cupriavidus metallidurans are specialized in the maximal viable response to heavy metals. Journal of Bacteriology, vol. 189/issue 20, pp 7417–7425, 2007.

  26. Nies D.H. Efflux -mediated heavy metal resistance in prokaryotes. FEMS Microbiology Reviews, vol. 27/issues 2-3, pp 313-339, 2003.

  27. Nies D.H. Microbial heavy -metal resistance. Applied Microbiology and Biotechnology, vol. 51/issue 6, pp 730-750, 1999.

  28. Nies D.H. Resistance to cadmium, cobalt, zinc, and nickel in microbes. Plasmid, vol. 27/issue 1, pp 17-28, 1992.

  29. Niklinska M. & Chodak M. & Laskowski R. Characterization of the forest humus microbial community in the heavy metal polluted area. Soil Biology and Biochemistry, vol. 37/issue 12, pp 2185-2194, 2005.

  30. Peix A . & Valverde A. & Rivas R. & Igual J.M. & Ramírez-Bahena M. H. & Mateos P. F. & Santa-Regina I. & Rodríguez- Barrueco C. & Martínez-Molina E. & Velázquez E. Reclassification of Pseudomonas aurantiaca as a synonym of Pseudomonas chlororaphis and proposal of three subspecies, P. chlororaphis subsp. chlororaphis subsp. nov., P. chlororaphis subsp. aureofaciens subsp. nov., comb. nov. and P. chlororaphis subsp. aurantiaca subsp. nov., comb. nov. International Journal of Systematic and Evoutionary Microbiology, vol. 57/issue 6, pp 1286-1290, 2007.

  31. Perron K. & Caille O. & Rossier C. & van Delden C. & Dumas J.L. & Köhler T. CzcR-CzcS, a two -component system involved in heavy metal and carbapenem resistance in Pseudomonas aeruginosa. The Journal of Biological Chemistry, vol. 279/issue 10, pp 8761-8768, 2004.

  32. Peťková K. & Lalinská -Voleková B. & Jurkovič Ľ. & Veselská V. Chemické a minerálne zloženie elektrárenských popolov (lokalita Zemianske Kostoľany). Mineralia Slovaca, vol. 43, 377-386, 2011.

  33. Rossbach S. & Mai D.J. & Carter E. L. & Sauviac L. & Capela D. & Bruand C. & Bruijn F.J. Response of Sinorhizobium meliloti to elevated concentrations of cadmium and zinc. Applied and Environmental Microbiology, vol. 74/issue 13, pp 4218-4221, 2008.

  34. Silver S. Bacterial resistances to toxic metal ions – a review. Gene, vol. 179/issue 1, pp. 9-19, 1996.

  35. Silver S. & Mistra T.K. Plasmid-mediated heavy metal resistances. Annual Review of Microbiology, vol. 42, pp. 717-743, 1988.

  36. Simine C.D. & Sayer J.A. & Gadd G.M. Solubilization of zinc phosphate by a strain of Pseudomonas fluorescens isolated from a forest soil. Biology and Fertility of Soils, vol. 28/issue 1, pp 87-94, 1998. GeoConference on Nano, Bio and Green – Technologies for a Sustainable Future

  37. Sipos R . & Székely A.J. & Palatinszky M . & Révész S . & Márialigeti K . & Nikolausz M. Effect of primer mismatch, annealing temperature and P CR cycle number on 16SrRNA gene -targetting bacterial community analysis. FEMS Microbiology Ecology, vol. 60/issue 2, pp 341-350, 2007.

  38. Uchino M. & Shida O. & Uchimura T . & Komagata K. Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov. Journal of General and Applied Microbiology, vol. 47/issue 5, pp 247-261, 2001.

  39. Vojtková H. & Janulková R. & Švanová P . Bacterium Cupriavidus metallidurans strain´s tolerance of metal ions. Inźynieria Mineralna, vol. 13/issue 2, pp 49-54, 2012.

  40. Vojtková H. & Janulková R. & Švanová P. Phenotypic characterization of Pseudomonas bacteria isolated from polluted sites of Ostrava, Czech Republic. GeoScience Engineering, vol. 58/issue 3, pp 52-57, 2012.

  41. Vojtková H. & Janulková R. & Švanová P. Physiological aspects of metal tolerance in Pseudomonas bacteria isolated from polluted sites in Ostrava, Czech Republic. 12th International Multidisciplinary Scientific Geo Conference SGEM 2012: 17. – 23. 6. 2012. Bulgaria: Albena, vol. 4, pp 177-183, 2012.

  42. Vojtková H. & Peťková K. & Jurkovič Ľ. Biochemical identification of b acteria Pseudomonas from anthropogenic sediments o f Zemianske Kostoľany, Slovakia. 13th International Multidisciplinary Scientific GeoConference SGEM 2013: 16. – 22. 6. 2013. Bulgaria: Albena, in print, 2013.

  43. Wyszkowska J. & Kucharski J. & Borowik A. & Boros E. Response of bacteria to soil contamination with heavy metals. Journal of Elementology, vol. 13/issue 3, pp 443- 453, 2008.

  44. Ahemad M. & Malik A. Bioaccumulation of heavy metals by zinc resistant bacteria isolated from agricultural soils irrigated with wastewater. Bacteriology Journal, vol. 2/ issue 1, pp 12-21, 2012.

  45. Bhagat R. & Srivastava S. Growth response of Pseudomonas stutzeri RS34 to ethylenediaminetetraacetic acid (EDTA) and its interaction with z inc. Indian Journal of Experimental Biology, vol. 31/issue 7, pp 590-594, 1993.

  46. Cánovas D. & C ases I. & d e Lorenzo V. Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis. Environmental Microbiology, vol. 5/issue 12, pp 1242-1256, 2003.

  47. Caille O. & Rossier C. & Perrron K. A copper -activated two -component system interacts with zinc and imipenem resistance in Pseudomonas aeruginosa. Journal of Bacteriology, vol. 189/issue 13, pp 4561-4568, 2007.

  48. Čerňanský S. & Urík M. & Ševc J. & Khun M. Biosorption and biovolatilization of arsenic by heat -resistant fungi. Environmental Science and Pollution Research International, vol. 14/special issue 1, pp 31-35, 2007.

  49. Diels L. & Dong Q. & van der Lelie D. & Baeyens W. & Mergeay M. The czc operon of Alcaligenes eutrophus CH34: from resistence mechanism to the removal of heavy metals. Journal of Industrial Microbiology, vol. 14/issue 2, pp 142-153, 1995.

  50. Elomari M. & Coroler L. & Verhille S. & Izard D. & Leclerc H. Pseudomonas monteilii sp. nov., isolated from clinical specimens. International Journal of Systematic Bacteriology, vol. 47/issue 3, pp 846-852, 1997.

  51. Gadd G.M. Metals, minerals and microbes: geomicrobiology and bioremediation. Microbiology, vol. 156/issue 3, pp 609-643, 2010.

  52. Giller K. E. & Witter E. & McGrath S. P. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biology and Biochemistry, vol. 30/issue 10-11, pp 1389-1414, 1998. GeoConference on Nano, Bio and Green – Technologies for a Sustainable Future

  53. Hassan M.T. & van der Leile D. & Springael D. & Römling U. & Ahmed N. & Mergeay M. Identification of a gene cluster, czr, involved in cadmium and zinc resistance in Pseudomonas aeruginosa. Gene, vol. 238/issue 2, pp 417-425, 1999.

  54. Hu N. & Zhao B. Key genes involved in heavy -metal resistance in Pseudomonas putida CD2. FEMS Microbiology Letters, vol. 267/issue 1, pp 17-22, 2007.

  55. Hu P. & Brodie E.L. & Suzuki Y. & McAdams H.H. & Andersen G.L. Whole - genome transcriptional analysis of heavy metal st resses in Caulobacter crescentus. Journal of Bacteriology, vol. 187/issue 24, pp 8437-8449, 2005.

  56. Hussein H. & Moawad H. & Farag S. Isolation and characterization of Pseudomonas resistant to heavy metals contaminants. Arab Journal of Biotechnology, vol. 7/issue 1, pp 13-22, 2004.

  57. Chen X. & Shi J . & Chen Y. & Xu X. & Xu S. & Wang Y. Tolerance and biosorption of copper and zinc by Pseudomonas putida CZ1 isolated from metal- polluted soil. Canadian Journal of Microbiology, vol. 52/issue 4, pp 308-316, 2006.

  58. Choudhury R. & Srivastava S. Zinc resistance mechanisms in bacteria. Current Science, vol. 81/issue 7, pp 768-775, 2001.

  59. Choudhury R. & Srivastava S. Mutational analysis of zinc resistance in Pseudomonas putida strain S4. Current Microbiology, vol. 43/issue 5, pp 316-321, 2001.

  60. Intorne A.C. & de Oliveira M. V. & de M Pereira L. & de Souza Filho G .A. Essential role of the czc determinant for cadmium, cobalt and zinc resistance in Gluconacetobacter diazotrophicus PAI 5. International Microbiology, vol. 15/issue 2, pp 69-78, 2012.

  61. Jurkovič Ľ. & Hiller E. & Veselská V. & Peťková K. Arsenic concentrations in soils impacted by dam failure of coal -ash pond in Zemianske Kostolany, Slovakia . Bulletin of Environmental Contamination and Toxicology, vol. 86/issue 4, pp 433-437, 2011.

  62. Keramati P. & Hoodaji M. & Tahmourespour A. Multi -metal resistance study of bacteria highly resistant to mercury isolated from dental clinic effluent. African Journal of Microbiology Research, vol. 5/issue 7, pp. 831-837, 2011.

  63. Kolenčík M. & Čerňanský S. & Urík M. & Littera P. & Molnárová M. & Gardošová K. & Štubňa J. & Vojtková H. & Chlpík J. Solubilization of toxic metal mineral by the Aspergillus niger strain and oxalic acid. Fresenius Environmenta l Bulletin, vol. 21/issue 8a, pp 2289-2297, 2012.

  64. Lalucat J. & Bennasar A. & Bosch R. & García-Valdés E. & Palleroni N.J. Biology of Pseudomonas stutzeri. Microbiology and Molecular Biology Reviews, vol. 70/issue 2, pp 510-547, 2006.

  65. Legatzki A. & Grass G . & Anton A. & Rensing C. & Nies D. H. Interplay of the Czc system and two P -type ATPases in conferring metal resistance to Ralstonia metallidurans. Journal of Bacteriology, vol. 185/issue 15, pp 4354-4361, 2003.

  66. Moffett B.F. & Nicholson F.A. & Uwakwe N.C. & Chambers B.J. & Harris J.A. & Hill T.C. Zinc contamination decreases the bacterial diversity of agricultural soil. FEMS Microbiology and Ecology, vol. 43/issue 1, pp 13-19, 2003. Section Advances in Biotechnology

  67. Moore E.R.B. & Mau M. & Arnscheidt A. & Bottger E.C. & Hutson R.A. & Collins M.D. & van de Peer Y. & de Wachter R. & Timmis K.N. The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships. Systematic and Applied Microbiology, vol. 19/issue 4, pp 478-492, 1996.

  68. Monchy S. & Benotmane M.A. & Janssen P. & Vallaeys T. & Taghavi S. & van der Lelie D. & Mergey M. Plasmids pMOL28 and pMOL30 of Cupriavidus metallidurans are specialized in the maximal viable response to heavy metals. Journal of Bacteriology, vol. 189/issue 20, pp 7417–7425, 2007.

  69. Nies D.H. Efflux -mediated heavy metal resistance in prokaryotes. FEMS Microbiology Reviews, vol. 27/issues 2-3, pp 313-339, 2003.

  70. Nies D.H. Microbial heavy -metal resistance. Applied Microbiology and Biotechnology, vol. 51/issue 6, pp 730-750, 1999.

  71. Nies D.H. Resistance to cadmium, cobalt, zinc, and nickel in microbes. Plasmid, vol. 27/issue 1, pp 17-28, 1992.

  72. Niklinska M. & Chodak M. & Laskowski R. Characterization of the forest humus microbial community in the heavy metal polluted area. Soil Biology and Biochemistry, vol. 37/issue 12, pp 2185-2194, 2005.

  73. Peix A . & Valverde A. & Rivas R. & Igual J.M. & Ramírez-Bahena M. H. & Mateos P. F. & Santa-Regina I. & Rodríguez- Barrueco C. & Martínez-Molina E. & Velázquez E. Reclassification of Pseudomonas aurantiaca as a synonym of Pseudomonas chlororaphis and proposal of three subspecies, P. chlororaphis subsp. chlororaphis subsp. nov., P. chlororaphis subsp. aureofaciens subsp. nov., comb. nov. and P. chlororaphis subsp. aurantiaca subsp. nov., comb. nov. International Journal of Systematic and Evoutionary Microbiology, vol. 57/issue 6, pp 1286-1290, 2007.

  74. Perron K. & Caille O. & Rossier C. & van Delden C. & Dumas J.L. & Köhler T. CzcR-CzcS, a two -component system involved in heavy metal and carbapenem resistance in Pseudomonas aeruginosa. The Journal of Biological Chemistry, vol. 279/issue 10, pp 8761-8768, 2004.

  75. Peťková K. & Lalinská -Voleková B. & Jurkovič Ľ. & Veselská V. Chemické a minerálne zloženie elektrárenských popolov (lokalita Zemianske Kostoľany). Mineralia Slovaca, vol. 43, 377-386, 2011.

  76. Rossbach S. & Mai D.J. & Carter E. L. & Sauviac L. & Capela D. & Bruand C. & Bruijn F.J. Response of Sinorhizobium meliloti to elevated concentrations of cadmium and zinc. Applied and Environmental Microbiology, vol. 74/issue 13, pp 4218-4221, 2008.

  77. Silver S. Bacterial resistances to toxic metal ions – a review. Gene, vol. 179/issue 1, pp. 9-19, 1996.

  78. Silver S. & Mistra T.K. Plasmid-mediated heavy metal resistances. Annual Review of Microbiology, vol. 42, pp. 717-743, 1988.

  79. Simine C.D. & Sayer J.A. & Gadd G.M. Solubilization of zinc phosphate by a strain of Pseudomonas fluorescens isolated from a forest soil. Biology and Fertility of Soils, vol. 28/issue 1, pp 87-94, 1998. GeoConference on Nano, Bio and Green – Technologies for a Sustainable Future

  80. Sipos R . & Székely A.J. & Palatinszky M . & Révész S . & Márialigeti K . & Nikolausz M. Effect of primer mismatch, annealing temperature and P CR cycle number on 16SrRNA gene -targetting bacterial community analysis. FEMS Microbiology Ecology, vol. 60/issue 2, pp 341-350, 2007.

  81. Uchino M. & Shida O. & Uchimura T . & Komagata K. Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov. Journal of General and Applied Microbiology, vol. 47/issue 5, pp 247-261, 2001.

  82. Vojtková H. & Janulková R. & Švanová P . Bacterium Cupriavidus metallidurans strain´s tolerance of metal ions. Inźynieria Mineralna, vol. 13/issue 2, pp 49-54, 2012.

  83. Vojtková H. & Janulková R. & Švanová P. Phenotypic characterization of Pseudomonas bacteria isolated from polluted sites of Ostrava, Czech Republic. GeoScience Engineering, vol. 58/issue 3, pp 52-57, 2012.

  84. Vojtková H. & Janulková R. & Švanová P. Physiological aspects of metal tolerance in Pseudomonas bacteria isolated from polluted sites in Ostrava, Czech Republic. 12th International Multidisciplinary Scientific Geo Conference SGEM 2012: 17. – 23. 6. 2012. Bulgaria: Albena, vol. 4, pp 177-183, 2012.

  85. Vojtková H. & Peťková K. & Jurkovič Ľ. Biochemical identification of b acteria Pseudomonas from anthropogenic sediments o f Zemianske Kostoľany, Slovakia. 13th International Multidisciplinary Scientific GeoConference SGEM 2013: 16. – 22. 6. 2013. Bulgaria: Albena, in print, 2013.

  86. Wyszkowska J. & Kucharski J. & Borowik A. & Boros E. Response of bacteria to soil contamination with heavy metals. Journal of Elementology, vol. 13/issue 3, pp 443- 453, 2008.

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